Links and Resources

This page links to code, papers, and other resources. (In progress).

Writing and “mathing”

Corrections to Harte (2011), Maximum Entropy and Ecology: A Theory of Abundance, Distribution, and Energetics. Updated September 2019. Link.

Software packages and code

EcoNetGen in R: Simulate and Sample from Ecological Interaction Networks. Link to R package in CRAN.

EcoNetGen in Python. Link.

EcoNetGen examples from Carl Boettiger.

Large collaborations

I am a member of a National Institute of Mathematical and Biological Synthesis (NIMBioS) working group Ecological Network Dynamics:Spatiotemporal variation and dynamics in ecological networks)

I am also a member of the Botanical Information and Ecology Network, BIEN. We recently released BIEN version 4.1.

More collaborations

I have multiple ongoing collaborations in various topic areas. Some are listed below.

Chaparral management effects on California bird communities

Scott Stephens, Department of Environmental Science, Policy, and Management. University of California, Berkeley

Justin Brashares, Department of Environmental Science, Policy, and Management. University of California, Berkeley

Morgan Tingley, Ecology and Evolutionary Biology, University of Connecticut

Fire ecology in French Polynesia

Jean-Yves Meyer, Délégation à la Recherche. Papeete, Tahiti, French Polynesia

Pascal Ortéga, Université de la Polynésie française. Punaauia, Tahiti, French Polynesia

Ecological interaction networks

David Hembry, Department of Entomology, Cornell University

Paulo R. Guimarães, Universidade de São Paulo, São Paulo, Brazil

Marcus A.M. de Aguiar, Universidade Esatudal de Campinas, São Paulo, Brazil