This page links to code, papers, and other resources. (In progress).
Writing and “mathing”
Corrections to Harte (2011), Maximum Entropy and Ecology: A Theory of Abundance, Distribution, and Energetics. Updated September 2019. Link.
Software packages and code
EcoNetGen in R: Simulate and Sample from Ecological Interaction Networks. Link to R package in CRAN.
EcoNetGen in Python. Link.
I am a member of a National Institute of Mathematical and Biological Synthesis (NIMBioS) working group Ecological Network Dynamics:Spatiotemporal variation and dynamics in ecological networks)
I have multiple ongoing collaborations in various topic areas. Some are listed below.
Chaparral management effects on California bird communities
Scott Stephens, Department of Environmental Science, Policy, and Management. University of California, Berkeley
Justin Brashares, Department of Environmental Science, Policy, and Management. University of California, Berkeley
Morgan Tingley, Ecology and Evolutionary Biology, University of Connecticut
Fire ecology in French Polynesia
Jean-Yves Meyer, Délégation à la Recherche. Papeete, Tahiti, French Polynesia
Pascal Ortéga, Université de la Polynésie française. Punaauia, Tahiti, French Polynesia
Ecological interaction networks
David Hembry, Department of Entomology, Cornell University
Paulo R. Guimarães, Universidade de São Paulo, São Paulo, Brazil
Marcus A.M. de Aguiar, Universidade Esatudal de Campinas, São Paulo, Brazil